#!/bin/csh -f

set name_of_protein = azur
set dir_of_strk = /opt/data/sdata/121-126/330ps
set dir_of_pdb = /home/xie/bet/strk
@ number_of_pdb_per_seg = 50
@ index_of_pdb = 1
@ iseg = 1
@ total = 1000

#check if the directory is correct
set a = `pwd`
if ( $a != $dir_of_pdb ) then
   echo "We are not in the right starting directory!"
   exit
endif

label_100:

echo $index_of_pdb, $iseg

   cd $dir_of_strk
   cp $name_of_protein.$iseg.tar.gz $dir_of_pdb
   cd $dir_of_pdb
   echo $name_of_protein.$iseg.tar.gz
   gunzip $name_of_protein.$iseg.tar.gz
   tar -xvf $name_of_protein.$iseg.tar
   rm -f $name_of_protein.$iseg.tar

   /bin/ls -1 *.pdb | sort -n -k 1.1 > tempo

   @ j = ( $iseg - 1 ) * $number_of_pdb_per_seg

   foreach ipdb ( `awk '{print $1}' tempo`) 

   @ j ++
   if($j < 10) then
      mv $ipdb $name_of_protein.0000$j
   else if($j >= 10 && $j < 100) then
      mv $ipdb $name_of_protein.000$j
   else if($j >= 100 && $j < 1000) then
      mv $ipdb $name_of_protein.00$j
   else if($j >= 1000 && $j < 10000) then
      mv $ipdb $name_of_protein.0$j
   else if($j >= 10000 && $j < 100000) then
      mv $ipdb $name_of_protein.$j
   endif

   echo $iseg, $ipdb, $j
   
   end

   @ iseg ++
   if ( $iseg <= 60 ) goto label_100



exit